How to cite the Bioconductor package chimera

chimera is a popular Bioconductor package that is available at https://bioconductor.org/packages/chimera. By citing R packages in your paper you lay the grounds for others to be able to reproduce your analysis and secondly you are acknowledging the time and work people have spent creating the package.

APA citation

Formatted according to the APA Publication Manual 7th edition. Simply copy it to the References page as is.

APA

The minimal requirement is to cite the R package in text along with the version number. Additionally, you can include the reference list entry the authors of the chimera package have suggested.

Example of an in-text citation

Analysis of the data was done using the chimera package (v1.32.0; Beccuti et al., 2014).

Reference list entry

Beccuti, M., Carrara, M., Cordero, F., Lazzarato, F., Donatelli, S., Nadalin, F., Policriti, A., & Calogero, R. A. (2014). Chimera: a Bioconductor package for secondary analysis of fusion products. Bioinformatics, 30(24), 3556–3557.

Vancouver citation

Formatted according to Vancouver style. Simply copy it to the references section as is.

Vancouver

Example of an in-text citation

Analysis of the data was done using the chimera package v1.32.0 (1).

Reference list entry

1.
Beccuti M, Carrara M, Cordero F, Lazzarato F, Donatelli S, Nadalin F, et al. Chimera: a Bioconductor package for secondary analysis of fusion products. Bioinformatics. 2014 Dec 15;30(24):3556–7.

BibTeX

Reference entry in BibTeX format. Simply copy it to your favorite citation manager.

BibTeX
@ARTICLE{Beccuti2014-kj,
  title     = "Chimera: a Bioconductor package for secondary analysis of fusion
               products",
  author    = "Beccuti, Marco and Carrara, Matteo and Cordero, Francesca and
               Lazzarato, Fulvio and Donatelli, Susanna and Nadalin, Francesca
               and Policriti, Alberto and Calogero, Raffaele A",
  journal   = "Bioinformatics",
  publisher = "Oxford University Press (OUP)",
  volume    =  30,
  number    =  24,
  pages     = "3556--3557",
  month     =  dec,
  year      =  2014,
  url       = "http://dx.doi.org/10.1093/bioinformatics/btu662",
  language  = "en",
  issn      = "1460-2059, 1367-4803",
  doi       = "10.1093/bioinformatics/btu662"
}

RIS

Reference entry in RIS format. Simply copy it to your favorite citation manager.

RIS
TY  - JOUR
AU  - Beccuti, Marco
AU  - Carrara, Matteo
AU  - Cordero, Francesca
AU  - Lazzarato, Fulvio
AU  - Donatelli, Susanna
AU  - Nadalin, Francesca
AU  - Policriti, Alberto
AU  - Calogero, Raffaele A
TI  - Chimera: a Bioconductor package for secondary analysis of fusion products
T2  - Bioinformatics
VL  - 30
IS  - 24
SP  - 3556-3557
PY  - 2014
DA  - 2014/12/15
PB  - Oxford University Press (OUP)
SN  - 1460-2059
DO  - 10.1093/bioinformatics/btu662
UR  - http://dx.doi.org/10.1093/bioinformatics/btu662
ER  - 

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