How to cite the Bioconductor package infercnv

infercnv is a popular Bioconductor package that is available at https://bioconductor.org/packages/infercnv. By citing R packages in your paper you lay the grounds for others to be able to reproduce your analysis and secondly you are acknowledging the time and work people have spent creating the package.

APA citation

Formatted according to the APA Publication Manual 7^th edition. Simply copy it to the References page as is.

APA

The minimal requirement is to cite the R package in text along with the version number. Additionally, you can include the reference list entry the authors of the infercnv package have suggested.

Example of an in-text citation

Analysis of the data was done using the infercnv package (v1.6.0; Tickle et al., 2019).

Reference list entry

Tickle, T., Tirosh, I., Georgescu, C., Brown, M., & Haas, B. (2019). inferCNV of the Trinity CTAT Project. Klarman Cell Observatory, Broad Institute of MIT and Harvard. https://github.com/broadinstitute/inferCNV

Vancouver citation

Formatted according to Vancouver style. Simply copy it to the references section as is.

Vancouver

Example of an in-text citation

Analysis of the data was done using the infercnv package v1.6.0 (1).

Reference list entry

1.
Tickle T, Tirosh I, Georgescu C, Brown M, Haas B. inferCNV of the Trinity CTAT Project [Internet]. Cambridge, MA, USA: Klarman Cell Observatory, Broad Institute of MIT and Harvard; 2019. Available from: https://github.com/broadinstitute/inferCNV

BibTeX

Reference entry in BibTeX format. Simply copy it to your favorite citation manager.

BibTeX

@MISC{Tickle2019-jl,
  title       = "{inferCNV} of the Trinity {CTAT} Project",
  author      = "Tickle, Timothy and Tirosh, Itay and Georgescu, Christophe and
                 Brown, Maxwell and Haas, Brian",
  institution = "Klarman Cell Observatory, Broad Institute of MIT and Harvard",
  year        =  2019,
  url         = "https://github.com/broadinstitute/inferCNV",
  address     = "Cambridge, MA, USA"
}

RIS

Reference entry in RIS format. Simply copy it to your favorite citation manager.

RIS

TY  - MISC
AU  - Tickle, Timothy
AU  - Tirosh, Itay
AU  - Georgescu, Christophe
AU  - Brown, Maxwell
AU  - Haas, Brian
TI  - inferCNV of the Trinity CTAT Project
PY  - 2019
DA  - 2019
CY  - Cambridge, MA, USA
UR  - https://github.com/broadinstitute/inferCNV
ER  -

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