How to cite the Bioconductor package mpra

mpra is a popular Bioconductor package that is available at https://bioconductor.org/packages/mpra. By citing R packages in your paper you lay the grounds for others to be able to reproduce your analysis and secondly you are acknowledging the time and work people have spent creating the package.

APA citation

Formatted according to the APA Publication Manual 7^th edition. Simply copy it to the References page as is.

APA

The minimal requirement is to cite the R package in text along with the version number. Additionally, you can include the reference list entry the authors of the mpra package have suggested.

Example of an in-text citation

Analysis of the data was done using the mpra package (v1.12.1; Myint et al., 2019).

Reference list entry

Myint, L., Avramopoulos, D. G., Goff, L. A., & Hansen, K. D. (2019). Linear models enable powerful differential activity analysis in massively parallel reporter assays. BMC Genomics, 20(1). https://doi.org/10.1186/s12864-019-5556-x

Vancouver citation

Formatted according to Vancouver style. Simply copy it to the references section as is.

Vancouver

Example of an in-text citation

Analysis of the data was done using the mpra package v1.12.1 (1).

Reference list entry

1.
Myint L, Avramopoulos DG, Goff LA, Hansen KD. Linear models enable powerful differential activity analysis in massively parallel reporter assays. BMC Genomics [Internet]. 2019 Dec;20(1). Available from: http://dx.doi.org/10.1186/s12864-019-5556-x

BibTeX

Reference entry in BibTeX format. Simply copy it to your favorite citation manager.

BibTeX

@ARTICLE{Myint2019-kw,
  title     = "Linear models enable powerful differential activity analysis in
               massively parallel reporter assays",
  author    = "Myint, Leslie and Avramopoulos, Dimitrios G and Goff, Loyal A
               and Hansen, Kasper D",
  journal   = "BMC Genomics",
  publisher = "Springer Science and Business Media LLC",
  volume    =  20,
  number    =  1,
  month     =  dec,
  year      =  2019,
  url       = "http://dx.doi.org/10.1186/s12864-019-5556-x",
  copyright = "http://creativecommons.org/licenses/by/4.0/",
  language  = "en",
  issn      = "1471-2164",
  doi       = "10.1186/s12864-019-5556-x"
}

RIS

Reference entry in RIS format. Simply copy it to your favorite citation manager.

RIS

TY  - JOUR
AU  - Myint, Leslie
AU  - Avramopoulos, Dimitrios G
AU  - Goff, Loyal A
AU  - Hansen, Kasper D
TI  - Linear models enable powerful differential activity analysis in massively
      parallel reporter assays
T2  - BMC Genomics
VL  - 20
IS  - 1
PY  - 2019
DA  - 2019/12
PB  - Springer Science and Business Media LLC
SN  - 1471-2164
DO  - 10.1186/s12864-019-5556-x
UR  - http://dx.doi.org/10.1186/s12864-019-5556-x
ER  -

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