How to cite the R package phangorn
phangorn is a popular R package that is available at https://cran.r-project.org/web/packages/phangorn/index.html. By citing R packages in your paper you lay the grounds for others to be able to reproduce your analysis and secondly you are acknowledging the time and work people have spent creating the package.
APA citation
Formatted according to the APA Publication Manual 7th edition. Simply copy it to the References page as is.
The minimal requirement is to cite the R package in text along with the version number. Additionally, you can include the reference list entry the authors of the phangorn package have suggested.
Example of an in-text citation
Analysis of the data was done using the phangorn package (v2.5.5; Schliep, 2011).
Reference list entry
Schliep, K. P. (2011). phangorn: phylogenetic analysis in R. Bioinformatics, 27(4), 592–593.
Vancouver citation
Formatted according to Vancouver style. Simply copy it to the references section as is.
Example of an in-text citation
Analysis of the data was done using the phangorn package v2.5.5 (1).
Reference list entry
1.Schliep KP. phangorn: phylogenetic analysis in R. Bioinformatics. 2011 Feb 15;27(4):592–3.
BibTeX
Reference entry in BibTeX format. Simply copy it to your favorite citation manager.
@ARTICLE{Schliep2011-to,
title = "phangorn: phylogenetic analysis in {R}",
author = "Schliep, Klaus Peter",
journal = "Bioinformatics",
publisher = "Oxford University Press (OUP)",
volume = 27,
number = 4,
pages = "592--593",
month = feb,
year = 2011,
url = "http://dx.doi.org/10.1093/bioinformatics/btq706",
language = "en",
issn = "1460-2059, 1367-4803",
doi = "10.1093/bioinformatics/btq706"
}
RIS
Reference entry in RIS format. Simply copy it to your favorite citation manager.
TY - JOUR AU - Schliep, Klaus Peter TI - phangorn: phylogenetic analysis in R T2 - Bioinformatics VL - 27 IS - 4 SP - 592-593 PY - 2011 DA - 2011/2/15 PB - Oxford University Press (OUP) SN - 1460-2059 DO - 10.1093/bioinformatics/btq706 UR - http://dx.doi.org/10.1093/bioinformatics/btq706 ER -
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phangorn R package release history
| Version | Release date |
|---|---|
| 2.5.3 | 2019-03-23 |
| 2.4.0 | 2018-02-16 |
| 2.3.1 | 2017-11-01 |
| 2.2.0 | 2017-04-03 |
| 2.1.1 | 2016-12-04 |
| 2.0.4 | 2016-06-21 |
| 2.0.3 | 2016-05-01 |
| 2.0.2 | 2016-01-23 |
| 2.0.1 | 2015-12-15 |
| 2.0.0 | 2015-12-10 |
| 1.99.14 | 2015-07-09 |
| 1.99-13 | 2015-04-08 |
| 1.99-12 | 2015-02-14 |
| 1.99-11 | 2014-11-11 |
| 1.99-9 | 2014-10-09 |
| 1.99-8 | 2014-10-07 |
| 1.99-7 | 2014-02-02 |
| 1.99-5 | 2014-01-02 |
| 1.99-1 | 2013-08-21 |
| 1.7-4 | 2013-04-04 |
| 1.7-1 | 2012-10-30 |
| 1.6-5 | 2012-10-10 |
| 1.6-4 | 2012-08-02 |
| 1.6-3 | 2012-07-01 |
| 1.6-0 | 2012-04-05 |
| 1.5-1 | 2011-12-13 |
| 1.5-0 | 2011-12-10 |
| 1.4-1 | 2011-06-30 |
| 1.4-0 | 2011-03-27 |
| 1.3-1 | 2011-02-14 |
| 1.3-0 | 2011-01-31 |
| 1.2-0 | 2010-11-22 |
| 1.1-2 | 2010-09-21 |
| 1.1-1 | 2010-09-03 |
| 1.1-0 | 2010-08-28 |
| 1.0-2 | 2010-05-16 |
| 1.0-1 | 2010-04-15 |
| 1.0-0 | 2010-03-18 |
| 0.99-6 | 2010-01-27 |
| 0.99-5 | 2010-01-15 |
| 0.99-4 | 2009-11-27 |
| 0.99-3 | 2009-10-30 |
| 0.99-2 | 2009-07-21 |
| 0.0-5 | 2009-01-22 |
| 0.0-4 | 2008-12-22 |
| 0.0-3 | 2008-10-28 |
| 0.0-2 | 2008-07-20 |
| 0.0-1 | 2008-03-25 |